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Healthy Chocolate Cheesecake Cake (with 2 Surprise Additions!)

Published September 13, 2025

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You know those moments when you stumble upon a recipe that makes you feel like you’ve been keeping a delicious secret from the world? That’s this cake. On the outside, it’s a rich, fudgy chocolate cake. On the inside? It’s hiding beets (yes, beets!) and topped with a tangy layer that tastes exactly like cheesecake—but wait for it—it’s made with cottage cheese. I know, I know, I sound like I’m trying to sneak kale into your brownies, but stay with me.

This healthy chocolate cheesecake cake is moist, indulgent, and surprisingly wholesome. It’s like the love child of your grandma’s chocolate cake and a trendy protein-packed dessert that could strut its stuff on Instagram.

Jump to Recipe

Why You’ll Love This Chocolate Cheesecake Cake:

  • It’s secretly nutritious. Beets give this cake a moist texture and add natural sweetness, fiber, and a boost of vitamins (without tasting like a salad). Cottage cheese brings protein to the frosting, making dessert justifiable for breakfast.
  • It’s chocolate cake. And, we’re giving you permission to use a boxed mix as the base! Enough said.
  • It’s make-ahead friendly. You can bake the cake a day or two in advance, drizzle later, and impress your friends without breaking a sweat.
  • It’s freezer-friendly. Got leftovers? Slice, wrap, and stash away for those nights when only chocolate cake will do.
  • It’s quirky and fun. Who else is bringing a beet cake with a high-protein drizzle to the party? That’s right—YOU.
Healthy Chocolate Cheesecake Cake (with 2 Surprise Additions!) Just Crumbs by Suzie Durigon
Healthy Chocolate Cheesecake Cake (with 2 Surprise Additions!)

Ingredients (and why they matter)

For the cake:

  • Cooked beets (about 2 medium) → The secret star. Pureed beets make this cake ridiculously moist and add subtle earthy sweetness. Don’t worry, no one will guess they’re there.
  • Chocolate cake mix → Because nobody wants to fuss with flour every single time we bake 😉
  • Eggs → For binding and fluffiness. Plus, protein boost!
  • Applesauce→ Keeps the cake moist. Oil and melted butter works too, but why not get your quota of fruit while you have dessert?

For the cheesecake layer:

  • Cottage cheese (blended until silky) → Our not-so-secret hack. It mimics cream cheese texture but adds protein.
  • Greek yogurt → Tangy backup singer, lightens up the .layer.
  • Sugar → Because dessert just isn’t dessert without some sugar!
  • Egg → Binds the layer while baking
  • Vanilla extract → Because every layer deserves flavor.
chocolate cheesecake cake
Healthy Chocolate Cheesecake Cake (with 2 Surprise Additions!)

How to Change It (Substitutions, Add-ins & Flavor Swaps)

  • No beets? Try pureed pumpkin or sweet potato. Different vibe, still moist and sneaky.
  • Make it gluten-free. Sub a good 1:1 gluten-free cake mix. Chocolate covers a multitude of sins.
  • Want a deeper chocolate punch? Add a handful of chocolate chips to the batter. Bonus goo factor.
  • Feeling fancy? Add a teaspoon of espresso powder to enhance the chocolate!.
  • Love texture? Fold in chopped walnuts or pecans for crunch.
  • Need dairy-free? Use dairy-free yogurt + silken tofu for the cheesecake layer. Totally works.

How to Make Chocolate Cheesecake Cake (Quick Guide)

  1. Preheat your oven to 350°F (175°C). Grease and/or line a 9″x13″ cake pan.
  2. Puree cooked, peeled beets until smooth (unless you are a “no waste” freak like me and you boil that huge bag of beets and freeze it in one cup measures for times exactly like this!!)
  3. In a mixer, add the cake mix; then stir in the beet puree, eggs and applesauce.
  4. Mix until just combined (don’t overmix—we’re making cake, not bricks).
  5. Pour into the pan and set aside.
  6. In a blender, blend cottage cheese, yogurt, sugar and egg until silky.
  7. Pour over the cake layer, and either swirl in or leave as two layers and place in the pre-heated oven.
  8. Bake for 40–45 minutes, until a toothpick comes out clean. Let it set slightly, then slice and enjoy.

Storing, Freezing & Make-Ahead Tips

  • Storing: Keep the cake covered at room temp for up to 2 days, or in the fridge for up to 5.
  • Freezing: Slice the cooled cake, wrap tightly in plastic + foil, and freeze for up to 3 months. I like to individually wrap each piece so you can take out one for your lunch, two when a friend stops by for a coffee or the whole thing when your family is over (or when you got a really bad haircut and the only thing to make you feel better is eating a whole cake…I speak from experience!). Place all the individually wrapped pieces in a heavy duty freezer bag to ensure it keeps fresh!
  • Make-ahead: Bake the cake a day ahead. Store it wrapped, in the fridge because of the cheesecake layer.
chocolate cheesecake cake
Healthy Chocolate Cheesecake Cake (with 2 Surprise Additions!)

Similar Recipes to Try

If this quirky cake made you smile, you might also like:

Have I convinced you to try this chocolate cheesecake cake? Starting with a boxed cake mix, adding in pureed beets, applesauce and cottage cheese, now you can have your cake and eat it too! What do you think? Wanna try??

chocolate cheesecake cake
Healthy Chocolate Cheesecake Cake (with 2 Surprise Additions!)

chocolate cheesecake cake

Healthy Chocolate Cheesecake Cake

This cake is made easier by starting with a boxed cake mix
Prep Time 20 minutes
Cook Time 40 minutes
Course Dessert
Cuisine American
Servings 12

Ingredients
  

For Cake:

  • 1 boxed chocolate cake mix
  • 1 cup puréed beets so notes below
  • 1/2 cup applesauce
  • 4 large eggs

For Cheesecake:

  • 1 cup cottage cheese
  • 3/4 cup granulated sugar
  • 2 tbsp yogurt can sub in sour cream
  • 1 large egg
  • 1 tsp vanilla extract

Instructions
 

  • Preheat oven to 350 degrees

For cake:

  • In the bowl of an electric mixer, add all cake ingredients and mix until well blended. Pour into a 9" x 13" baking pan that has been lined with parchment paper or sprayed with cooking spray; set aside

For Cheesecake layer:

  • In a blender, combine all of the cheesecake ingredients and blend until smooth; pour over the cake layer and swirl into the cake with a knife (until you get a marbled look)
  • Place baking dish in the oven and bake for 40-50 minutes (until centre is firm).
  • Let cool in pan before slicing.
Keyword healthy, high protein

The Recipe

Chocolate Beet Cake with Cottage Cheese Drizzle

Equipment Needed:

  • Blender or food processor (for the beets and drizzle)
  • Mixing bowls
  • Whisk
  • Measuring cups + spoons
  • 8-inch cake pan or loaf pan
  • Rubber spatula

Ingredients:

  • 2 medium cooked beets, peeled and pureed
  • 1 cup all-purpose flour (or half whole wheat)
  • ½ cup cocoa powder
  • 1 cup sugar (or coconut sugar)
  • 2 large eggs
  • ½ cup oil (vegetable or light olive)
  • 1 tsp vanilla extract
  • 1 tsp baking powder
  • ½ tsp baking soda
  • ½ tsp salt

Drizzle:

  • ½ cup cottage cheese
  • ¼ cup Greek yogurt
  • ½ cup powdered sugar
  • 1 tsp lemon juice
  • ½ tsp vanilla extract

Instructions:

  1. Preheat oven to 350°F (175°C). Grease and line a cake or loaf pan.
  2. Puree beets until smooth.
  3. In a bowl, whisk flour, cocoa, baking powder, soda, and salt.
  4. In another bowl, beat sugar, eggs, oil, and vanilla. Stir in beet puree.
  5. Fold wet into dry until combined. Pour into pan.
  6. Bake 40–45 minutes, until a toothpick comes out clean.
  7. Blend all drizzle ingredients until smooth.
  8. Cool cake fully, drizzle over top, slice, and serve.

Nutrition (per slice, based on 10 servings):

  • Calories: ~210
  • Protein: 6g
  • Carbs: 28g
  • Fat: 9g
  • Fiber: 2g
  • Sugar: 16g

And there you have it—a quirky, secretly-healthy-but-still-decadent chocolate cake that’ll make people ask, “Wait, did you say beets?”

Just Crumbs Blog

Hi, I’m Suzie Durigon

Thanks for Visiting!

Chef, food blogger, and culinary instructor with a deep passion for all things food. On Just Crumbs, I share my love for cooking, growing, and enjoying delicious meals. I also started the “Bake it Forward” movement, where I spread joy with homemade treats. When I’m not in the kitchen, you can find me spending time with my family, pets, or tending to my garden.

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